Insertion junction: CLIP2.046430_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046430
Chromosome:chromosome 13
Location:4859122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605100 PDE20 (1 of 1) PF00233//PF01590 - 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I) // GAF domain (GAF); 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCTGGTCAATCATGGCCCTGCGAGGGGTTCAAAGGACGGAAGGTGG
Internal bar code:TGTGAATGTCACTGAACTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2442
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTTAACACCGCACAGC
Suggested primer 2:GCAGGTTCATAGTGGTGCCT