Insertion junction: CLIP2.046431_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046431
Chromosome:chromosome 14
Location:1575965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCGGCATGGCCGTCCCGCCGTCCCGGGGTTGGTCATCCAGTGTGT
Internal bar code:AGCCTTTATATCCAAATGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1569
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTGCAATGGATCTGGT
Suggested primer 2:GAAGAAACCGAGCGTCAGGA