Insertion junction: CLIP2.046432_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046432
Chromosome:chromosome 3
Location:346878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144607 (1 of 79) IPR011992 - EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCCTCACCGCTGAGGTGCTGGAACATGTACTCGATCATGCTCAGC
Internal bar code:AGTGATGAGGCGTTCGGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:229
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGGCAAAAGCACAGGAG
Suggested primer 2:TGTGTGCTGTGGTGAAAGGT