Insertion junction: CLIP2.046432_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046432
Chromosome:chromosome 3
Location:346886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144607 (1 of 79) IPR011992 - EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGGGGGCCGAAAGGGAGTGGAGAGGCAGGAGGCAGGAAGGAGGGA
Internal bar code:AGTGATGAGGCGTTCGGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:298
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGCTGTGGTGAAAGGT
Suggested primer 2:CCAAGGCAAAAGCACAGGAG