Insertion junction: CLIP2.046438_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046438
Chromosome:chromosome 6
Location:6901320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296750 HYDEF,HYDEF1 (1 of 1) PTHR11649//PTHR11649:SF59//PTHR22976//PTHR22976:SF28 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED // BIOTIN SYNTHASE // SUBFAMILY NOT NAMED; Iron hydrogenase assembly protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTGCCGCAGAGTGCGCCGGCGGACGGATGAGCTACTAACCATCCAAG
Internal bar code:AGTGCTAAACAATTTCCCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1132
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGAGAGTGTGAGCAGCT
Suggested primer 2:TGCTCTCATTCATGCAGCCA