Insertion junction: CLIP2.046446_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046446
Chromosome:chromosome 7
Location:4571874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800837 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGGGAGGGGAGGAGATTCATACAATCATGATAATGTAAGAAGGGGG
Internal bar code:CCCTGCTCTTGCGGAGTTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1769
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCAATGCTGCTGGTGCC
Suggested primer 2:GTACGGCTGGTATACGACGG