Insertion junction: CLIP2.046450_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046450
Chromosome:chromosome 1
Location:4920832
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g034150 (1 of 1) PTHR10110//PTHR10110:SF86 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 7-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGCAGACAGGCACGATCGATGCGGTGGACGTGTGCTATAGCTATAG
Internal bar code:AATACAACCGGAGGTTATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:151
LEAP-Seq percent confirming:1.88679
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAAGTCGCTGACCCACA
Suggested primer 2:CACACACCTCCTCTTTCCCC