Insertion junction: CLIP2.046457_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046457
Chromosome:chromosome 13
Location:4911538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605386 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCAACGCAAGTGACCAGCGCCCAAAGGGGATGTGACACGGTGGGGGT
Internal bar code:TCGGTCAACAGCGTGCATTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2315
LEAP-Seq percent confirming:58.1395
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGCCATATTCTTGCAGC
Suggested primer 2:CTTACGATCCCGCTGATCCC