Insertion junction: CLIP2.046462_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046462
Chromosome:chromosome 13
Location:4903423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605350 (1 of 9) PTHR11258//PTHR11258:SF11 - 2-5 OLIGOADENYLATE SYNTHETASE // SUBFAMILY NOT NAMED 5'UTR
Cre13.g605368 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGACGGCTCAACGTAAGTCGGGTTGTGTTTCGGTGTCACTCTGTTAT
Internal bar code:GGGGCCTGACAAGACGGTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1432
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGAAAACCAAAGCGCAA
Suggested primer 2:CGCAGAACACGAGCAAAACA