Insertion junction: CLIP2.046477_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046477
Chromosome:chromosome 6
Location:4766898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279650 OPR24 OctotricoPeptide Repeat protein 24 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGCACCGGCGTACGGCAAACAGGTGCACACTAGGGAACACCTCTGT
Internal bar code:GTCGAATACTACCACGTGACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:570
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATTCCCCGGCCCTTTAC
Suggested primer 2:TCCCATTCGTGGAGCCTCTA