Insertion junction: CLIP2.046483_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046483
Chromosome:chromosome 16
Location:724082
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g691050 (1 of 1) PF08381 - Transcription factor regulating root and shoot growth via Pin3 (BRX) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGGCCTGATGAGTCAGTGTGCCACACGGCATGGGTTCAAGGCGTGTC
Internal bar code:GTTCGTAGGCTCGTCCTAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:70
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCATTCTGGCTGGAGCTT
Suggested primer 2:CTCCAATCTGTCCAACCGCT