Insertion junction: CLIP2.046490_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046490
Chromosome:chromosome 2
Location:886691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078950 MMP17 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTTGAGACCTGCTCTCACGGCTACGCGCCCTTCAAGTGAGTACCGGT
Internal bar code:GTTGACCACTGTCGGGTTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2502
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCAATGCACAGCAACGG
Suggested primer 2:CTCACACACACAGGACCCTC