Insertion junction: CLIP2.046497_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046497
Chromosome:chromosome 13
Location:684811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566350 (1 of 9) 2.7.10.1 - Receptor protein-tyrosine kinase / Receptor protein tyrosine kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGCGACAGACCCGGATACACGGGCGCCAGGCATGCCAGCTCCCTGT
Internal bar code:AGAAATCGGGGGGTTTTATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1319
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGGAACATGACGAGTCC
Suggested primer 2:TGCTGCTGCTGCTGATTTTG