Insertion junction: CLIP2.046498_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046498
Chromosome:chromosome 8
Location:3199888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376720 CEP7 Cysteine endopeptidase; (1 of 5) 3.4.22.33 - Fruit bromelain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACCTGCACCGAACGCGCATGCAGCAGGTACTGCTAGTGAAGAATGAT
Internal bar code:CAAGCTTACCGGCGCCCTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3241
LEAP-Seq percent confirming:94.2029
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCTGACGCACACACATA
Suggested primer 2:GCCCCACGAGTTCTTGATGA