Insertion junction: CLIP2.046500_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046500
Chromosome:chromosome 6
Location:2035126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800622 (1 of 8) PF06011 - Transient receptor potential (TRP) ion channel (TRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCAGCTGCCTCGCGCCCGACCAGAGCCCCGCCGGCCAGGCACGTGCG
Internal bar code:ATTATGAACTGACGCTGTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3626
LEAP-Seq percent confirming:69.697
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGAGCCATCACCATCG
Suggested primer 2:CCCATCCTCCTCTCCACTCA