Insertion junction: CLIP2.046501_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046501
Chromosome:chromosome 14
Location:3955716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632860 (1 of 19) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGACAGGCACAGCGGGTTCGGTTTAGTTTGGGCTGGTATCTACAACCC
Internal bar code:GAATAGAGGGCTAGGGCCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2894
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAGGTGAGCGTGATGTG
Suggested primer 2:AGGTGGGGTCCCTCATCTAC