Insertion junction: CLIP2.046502_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046502
Chromosome:chromosome 1
Location:3676691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCGTACGGCGGGTAGCCGTAGGCCTGCGGCGGGTAGGCTTGGTAGCCC
Internal bar code:ACGCACGTTGAGGCTGCATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2188
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTGCTGACATTCTCCT
Suggested primer 2:ATTCGATCGGCGGCAAACAT