Insertion junction: CLIP2.046504_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046504
Chromosome:chromosome 11
Location:1212978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467688 (1 of 1) 1.2.3.7 - Indole-3-acetaldehyde oxidase / Indoleacetaldehyde oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGT
Internal bar code:TCAAAATCAGGGTCCTGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1147
LEAP-Seq percent confirming:84.375
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGCTGGTTCTGAAGACG
Suggested primer 2:GGGTCAGGTAGGAGGGGAAT