Insertion junction: CLIP2.046504_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046504
Chromosome:chromosome 11
Location:1212993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467688 (1 of 1) 1.2.3.7 - Indole-3-acetaldehyde oxidase / Indoleacetaldehyde oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGAGGTGGACGCCTTCAACGCCGCCCACCCCTGGACCAAGCGCGGCC
Internal bar code:GGATTACCGGGGTGCAAGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:296
LEAP-Seq percent confirming:10.8696
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCAGGTAGGAGGGGAAT
Suggested primer 2:AGGTGCTGGTTCTGAAGACG