Insertion junction: CLIP2.046526_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046526
Chromosome:chromosome 16
Location:6130026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677150 (1 of 2) 2.4.1.122 - Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAAACCTCATCATCCGCGTAAGCGCGCGGTATCACTCACCGCATGTC
Internal bar code:TCGGTCACAACTGACTGCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2273
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAAGACACCTGCAGGCA
Suggested primer 2:GTGCGGTTTTGGGGAAGTTC