Insertion junction: CLIP2.046526_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046526
Chromosome:chromosome 16
Location:6130028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677150 (1 of 2) 2.4.1.122 - Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAGGCGCTATTGCGTCATGCGACAGCTAGGCTGGAGGCCAGGCGCGG
Internal bar code:CGATGTCATCCTTACTGTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2923
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGGTTTTGGGGAAGTTC
Suggested primer 2:CAGTAAGACACCTGCAGGCA