Insertion junction: CLIP2.046528_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046528
Chromosome:chromosome 17
Location:4877933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735021 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCTCACGGCACGCAACCTCACGCACCTGGCCTGACACTGCCTCCAGT
Internal bar code:ATAGTCCTTGGTCGCGATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTGTGTGTGTGTGTGT
Suggested primer 2:CACACACACGTACGACTCCA