Insertion junction: CLIP2.046528_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046528
Chromosome:chromosome 17
Location:4877934
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735021 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAATCAAGTCCCACGAACCCCACTCCAAACACCTTACATAATACCCCT
Internal bar code:ATAGTCCTTGGTCGCGATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1363
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACGTACGACTCCA
Suggested primer 2:AGGTGTGTGTGTGTGTGTGT