Insertion junction: CLIP2.046534_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046534
Chromosome:chromosome 3
Location:8228417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200100 PUX10 Plant UBX domain-containing protein 10; (1 of 1) K18726 - FAS-associated factor 2 (FAF2, UBXD8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGGATCGGTGTCTGGGGTTCGCCTAGCCCCAACGACAGCCCTGCACC
Internal bar code:AGTGCGAACAAATGATTTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGATTTGAAGTCGGCCA
Suggested primer 2:TTACAACAGATTCGGGGGCC