Insertion junction: CLIP2.046536_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046536
Chromosome:chromosome 17
Location:2444614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715000 HSP33 Heat shock protein 33; (1 of 1) K04083 - molecular chaperone Hsp33 (hslO) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCGGGTGCTGGGGATGCGCAAGGCTGCAAACACCAACCATGCCGTGC
Internal bar code:CATTTCTTCAATCTCCACCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:134
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTGTGTGTGTGTGTGT
Suggested primer 2:TCAGGCGTTAAGGGTCACAC