Insertion junction: CLIP2.046540_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046540
Chromosome:chromosome 5
Location:1530007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234662 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAGTAGTAGGCCTGTGGGGACGGTGCGTGGGTTGAGGACGCGACGTG
Internal bar code:TTATTCGGGTCCCAAGTTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTATCCACCGGTGCGTT
Suggested primer 2:CCTATGCCACGTCTCGAGTC