Insertion junction: CLIP2.046548_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046548
Chromosome:chromosome 8
Location:3585710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379500 (1 of 1) IPR000719//IPR002290//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGGCGCCTACCTTGAGCAGCACGTTCTCCGGCTTCAGGTCGCAGTGG
Internal bar code:AAATGGGGTACTGGCATAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1930
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGACACGACATGACATGC
Suggested primer 2:GCTTCTTGTCCCCTCCCTTC