Insertion junction: CLIP2.046552_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046552
Chromosome:chromosome 1
Location:3853491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025350 FAP235 (1 of 3) PF03703 - Bacterial PH domain (bPH_2); Flagellar Associated Protein 235 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGACATATTCCGCTAGTGATGTGCGTCCGGGGGGAGGGCTGTGGTGCT
Internal bar code:GTTATAGTCGTTAGTCATGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1538
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTGGACGGCTTACTGTG
Suggested primer 2:GCCTGCATGACAGCGTAATG