Insertion junction: CLIP2.046553_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046553
Chromosome:chromosome 17
Location:3914020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727850 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTCCAGCGCGTTCCACAGACCGACCGCGCCCGCGCTCTCGGCCTCGG
Internal bar code:TCCGTTTCCCGAAAGACAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:796
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGCAGTAGCAGGAGCAG
Suggested primer 2:TGAAGTGGCAGTAGCTGTCG