Insertion junction: CLIP2.046554_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046554
Chromosome:chromosome 10
Location:3406617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444000 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGTAGCGTAGCGTGCGCAAGCCATGGTGCATTCCGCGAAGTCCACGG
Internal bar code:TAGCCTCTTAATCTTGTTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2140
LEAP-Seq percent confirming:98.7179
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTCGCATGAGAGCAGTT
Suggested primer 2:GGCTCACTATCGCCCACTAC