Insertion junction: CLIP2.046555_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046555
Chromosome:chromosome 4
Location:2925598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224600 (1 of 1) IPR000253//IPR011598 - Forkhead-associated (FHA) domain // Myc-type, basic helix-loop-helix (bHLH) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGTGAGCGTCGCCAACATCATGGCTGTAGCATCATCCACCTCGGCTG
Internal bar code:CGGCTCCCTAGGTTACTGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1478
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAATCCATGCACCTGACCCA
Suggested primer 2:GCAACCATTGATGATCCCGC