Insertion junction: CLIP2.046559_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046559
Chromosome:chromosome 13
Location:1125512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569450 (1 of 1) IPR000104//IPR029058 - Antifreeze protein, type I // Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGACATCTCCCCAGCAGGAGCCACGCACGCGTCTTGTTCGCCCCCGCC
Internal bar code:TATAATTTTTTTTTGAGACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTTCAGGTTCAGGATGG
Suggested primer 2:ATGCAGAAATGGACGCTGGA