Insertion junction: CLIP2.046559_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046559
Chromosome:chromosome 13
Location:1125513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569450 (1 of 1) IPR000104//IPR029058 - Antifreeze protein, type I // Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACCATCTCTCGGGAGTGGGGACCATCTGTCCACAGACACCGCACGCA
Internal bar code:CATGTATAGATTACAATCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1966
LEAP-Seq percent confirming:47.2222
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGAAATGGACGCTGGA
Suggested primer 2:GGGGTTCAGGTTCAGGATGG