Insertion junction: CLIP2.046561_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046561
Chromosome:chromosome 3
Location:7450217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205850 MAE6,MFT6 MATE efflux family protein; (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACGGCCGGTCCCCGGCACGTCTGCTTTTCTGTGCACCACCGTTCGGC
Internal bar code:AGCCTGCGGCCTAGGTCCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1506
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGAAGTGCACTACCAAGT
Suggested primer 2:AAAACGGGGTTGTCGCAATG