Insertion junction: CLIP2.046563_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046563
Chromosome:chromosome 1
Location:2607150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTATCTCAACTCACTTGTTGCATCTGATAAGGCCACTCTCCAGCGCA
Internal bar code:GTATTAGCAGTCGGGTGGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2377
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCACGCAAAACAAACC
Suggested primer 2:GTAGGCAGTTTTGGTTGCGG