Insertion junction: CLIP2.046565_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046565
Chromosome:chromosome 7
Location:1699313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325711 (1 of 2) K19363 - lipopolysaccharide-induced tumor necrosis factor-alpha factor (LITAF) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAAGGGATGCGCAAACGGCACAGCGTCCCAACCCTTTGGCCTGACAC
Internal bar code:GTACTGTTAATGGCTCGTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4218
LEAP-Seq percent confirming:23.5955
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTTTGGGACTGCACTGT
Suggested primer 2:TGGGTTTCTGGGTGCAAAGT