Insertion junction: CLIP2.046565_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046565
Chromosome:chromosome 7
Location:1699324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325711 (1 of 2) K19363 - lipopolysaccharide-induced tumor necrosis factor-alpha factor (LITAF) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGACGGCATGGTTTTGCGCTTGCCGTATGACGCTGATTTCCCGCCCC
Internal bar code:GGGTTACCTTGTGTTCGGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1204
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTTTCTGGGTGCAAAGT
Suggested primer 2:TGGTTTTGGGACTGCACTGT