Insertion junction: CLIP2.046565_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046565
Chromosome:chromosome 8
Location:4211462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384000 CYP26,CYP771A1 (1 of 3) IPR001128//IPR002397//IPR002401//IPR002403 - Cytochrome P450 // Cytochrome P450, B-class // Cytochrome P450, E-class, group I // Cytochrome P450, E-class, group IV; Cytochrome P450, CYP197 superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCACGCATGGTGCGTGGCCGCGGGCCTTTCGGGACCGTGGCCCACA
Internal bar code:CTTCGACTCTGGTGTTATATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:933
LEAP-Seq percent confirming:38.0952
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACATTACGCAGCCATC
Suggested primer 2:GCTACACTCCCAACCTCCAC