Insertion junction: CLIP2.046566_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046566
Chromosome:chromosome 10
Location:730077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422500 (1 of 1) PF09113 - Peptide-N-glycosidase F, C terminal (N-glycanase_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGATGCCAAAGAGCAGTGAGGAAGGTGCCTGTGGCATGGGACCTGGAT
Internal bar code:GACATAGTAGTAACTGATAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1489
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCGCCTTCATACACAAT
Suggested primer 2:CACACCTTTCCCCTGGACTC