Insertion junction: CLIP2.046574_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046574
Chromosome:chromosome 9
Location:5452338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801071 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGCGGCCGTGCATACCGCCGCGGTGATCCAAGCCTCATCCCAAACCG
Internal bar code:TTTTTAATTAAAATACACTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2437
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGCACACACATGACACG
Suggested primer 2:GCAATAAAGGTAGCCGCAGC