Insertion junction: CLIP2.046578_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046578
Chromosome:chromosome 2
Location:7210001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800259 CDS
Cre09.g390801 (1 of 1) PTHR11918//PTHR11918:SF77 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTTACGCTCCCCACGCCGCCATTCATGTCCACGCTACCTTTATTACG
Internal bar code:GTGTCGGTAAGAACCCGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:522
LEAP-Seq percent confirming:25.3968
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGTCCGTGAACAGATG
Suggested primer 2:GGCCTCTTGCTAACCCACAT