Insertion junction: CLIP2.046582_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046582
Chromosome:chromosome 3
Location:5414184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183800 (1 of 1) PF10225 - Uncharacterized conserved protein (DUF2215) (DUF2215) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGCGGGAGAGCCACGCATGGCACCCTGGCATAGTGCTGCTACGTGAG
Internal bar code:ATTCCGTAGAGGGTCAATCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4391
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACAAGTTCGTGCTGGG
Suggested primer 2:GGCCAAACGTCTCACCAAAC