Insertion junction: CLIP2.046587_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046587
Chromosome:chromosome 2
Location:8452588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142353 TSH1 (1 of 1) IPR013320//IPR013806 - Concanavalin A-like lectin/glucanase domain // Kringle-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTGCGGGGTGGCGCATTGTGGAGAGATACAGGCATTCAGCAACTGCT
Internal bar code:CTTAGTACGTTCACGGAGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:912
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCACATTGGCGCCAGAAGAT
Suggested primer 2:AGGTGGAGCAGCTGTACAAC