Insertion junction: CLIP2.046593_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046593
Chromosome:chromosome 7
Location:1457913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323800 CDS
Cre07.g323850 PPP27 (1 of 2) PTHR12210//PTHR12210:SF68 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGTGGCCTAACTGGTAGCATAGTCAAACAAACACAGACATTTCTATC
Internal bar code:CGGTGCGAGCAAAGGCGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:6721
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:140
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:144

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCATCATGGTTACGCAA
Suggested primer 2:TCCTCCAGACCAGTCCTCAG