Insertion junction: CLIP2.046593_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046593
Chromosome:chromosome 7
Location:1457922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323800 CDS
Cre07.g323850 PPP27 (1 of 2) PTHR12210//PTHR12210:SF68 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACTTTGCACTGGCACAGCAGGCATTCCCATCGCGATTGCATTCCATT
Internal bar code:AATGATATATGCCGTACTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5569
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCAGACCAGTCCTCAG
Suggested primer 2:AGGGCATCATGGTTACGCAA