Insertion junction: CLIP2.046606_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046606
Chromosome:chromosome 13
Location:1131264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569500 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGGCCGTCAGCTGCTGCTGGCGGCTGTAGCGCTGCACGGGCACGCCG
Internal bar code:GTAGAGGACTTTGGGAGTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3835
LEAP-Seq percent confirming:80.3571
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCTGCATTCGACTAGAT
Suggested primer 2:GGAGCACGAAGAGACAACCA