Insertion junction: CLIP2.046607_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046607
Chromosome:chromosome 14
Location:2079122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621400 (1 of 1) IPR001810//IPR025886 - F-box domain // Phloem protein 2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGAAATGGCGAAATCAGGACACCCAGCGCGCGCCTCTGCCCCATCCTG
Internal bar code:ACTTTGCTACGACTAATATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2505
LEAP-Seq percent confirming:63.4921
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCGTCCCTCACATGTTT
Suggested primer 2:TGTGCCACGTACATGTTCGA