Insertion junction: CLIP2.046608_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.046608
Chromosome:chromosome 3
Location:4149041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172900 (1 of 2) PF11371 - Protein of unknown function (DUF3172) (DUF3172) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGTGGCCCACCGCTGTGGCAGCTGGTGGCAGGCGGCAAGCAGCGCTG
Internal bar code:TTGTTGGCTTGCATAATGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1782
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGCAGGACTTTTGTGCC
Suggested primer 2:CGAGCCCTAGCACTCACAAA