Insertion junction: CLIP2.046608_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046608
Chromosome:chromosome 3
Location:4149048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172900 (1 of 2) PF11371 - Protein of unknown function (DUF3172) (DUF3172) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCACAAAGACCTGTGGGAGCGCAGACGGGCCAAAGGTTGCTGTCAAG
Internal bar code:TTGTTGGCTTGCATAATGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2272
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCCCTAGCACTCACAAA
Suggested primer 2:CAGTGCAGGACTTTTGTGCC