Insertion junction: CLIP2.046610_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046610
Chromosome:chromosome 2
Location:6968642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389356 (1 of 1) K03457 - nucleobase:cation symporter-1, NCS1 family (TC.NCS1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGGTCCTTACGGCGCATGAGCCAGGGGGATTAAATCGAGAAAAGCCAA
Internal bar code:GGTTTAAGGGATGGAGAATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:226
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCACACATACCACCCAGTCC
Suggested primer 2:CAGCCAAGAAGAGGGGAAGG